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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811169.1_cds_XP_016496599.1_10803
CDS Infomation

[gene=LOC107815517] [db_xref=GeneID:107815517] [protein=protein ROOT PRIMORDIUM DEFECTIVE 1-like isoform X5] [protein_id=XP_016496599.1] [location=complement(join(14466..14520,14774..15723))] [gbkey=CDS]
Sequence

ATGCATAAATGTATGAGGATCTTCTCACTAATTGAGTCTCAAAAATGGTTTACATTCGAT
GGAAGGCAAAGATTATGCCATCCACTGCCATCCGTGAGAGTTGGACATATGTGGGTGCAA
ATCATGTTCAAAACCAGTGGAGGAAGGAGGCCTAAGAAGAAAACATATTATAGAGTAAAT
GAACTAGACAGAGTCATGGAGCTTCAGAAGAAACCATCATTGATTTTACGCCTAAAATCC
ATCATTCAATCACAGAAAAACCAATGCCTCCTTCTTAGAGACCTTGAGAAGGAAGTTGGA
TTTGTGCAAAAGTGGAATTTTATGGGTATAATTGAGAAATATCCTTCGATATTCCGTGTC
ACTGGTGGTAATAGAACTCCACCGATGGTTATGCTCGCCGAAAAAGCTGATAAAGTTGCA
TTAGAAGAAAGTGAAGCAAGAGCGCAAATGGAACCCATTTTAGTCAAGACTCTAAGGAAG
TTGTTAATGTTGTCGGTTGATTGCATGCTGCCACTGGAAACCATTCAACTGATTGAGAAT
GAATTGGGCTTGCCTAGTGACTTCGAGCAGTCGCTTGTTCCAAAATACCCACAATTTTTC
TCAGTGAAAGATGTCAACGGAAGAACTTTCCTTCAATTGGAGAATTGGGATTCTTCACTA
GCAGTCACTGCCCGGGAGGAAAGGTTGGTGCATGAAGGGGTCCTGACTTCGAAAGTGCAG
GCTAGAATATTGAAGGATGGAAACTATGTTGGCCCTTTTGCGTTTCAATTACGTTATCCT
GCTGGCTTCAGGCCAAACGTGAACTACCTCAAGGAAGTGCAGAAGTGGCAGAAGATGGAG
TTCCCTTCTCCATACTTGAATGCCAGAAGATTTGAACTTGCTGATCCCAAAGCTCAAAAA
AGAGTGGTAGCTGTGCTTCATGAGTTCCTCAGTTTGACTATGGAAAAGAGGATAATACGA
ATATTGGTGGATAAGACAAAATCATGGTTTTCTTACAGTTCCTGA

Peptide Sequence

PEP ID

XP_016496599.1
PEP Infomation

PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like isoform X5 [Nicotiana tabacum]
Sequence

MHKCMRIFSLIESQKWFTFDGRQRLCHPLPSVRVGHMWVQIMFKTSGGRRPKKKTYYRVN
ELDRVMELQKKPSLILRLKSIIQSQKNQCLLLRDLEKEVGFVQKWNFMGIIEKYPSIFRV
TGGNRTPPMVMLAEKADKVALEESEARAQMEPILVKTLRKLLMLSVDCMLPLETIQLIEN
ELGLPSDFEQSLVPKYPQFFSVKDVNGRTFLQLENWDSSLAVTAREERLVHEGVLTSKVQ
ARILKDGNYVGPFAFQLRYPAGFRPNVNYLKEVQKWQKMEFPSPYLNARRFELADPKAQK
RVVAVLHEFLSLTMEKRIIRILVDKTKSWFSYSS

Transcript Sequence

Gene sequence data has not been registered.